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Java

In Finland, Scientists Are Growing Coffee In a Lab (fastcompany.com) 44

An anonymous reader quotes a report from Fast Company: [R]esearchers in Finland are experimenting with growing coffee from plant cells in bioreactors. There are several reasons why it might make sense to have such an alternative, says Heiko Rischer, a research team leader at VTT Technical Research Centre of Finland, the state-owned organization developing the coffee. "Conventional coffee production is notoriously associated with several problematic issues, such as unsustainable farming methods, exploitation, and land rights," he says. "Growing demand and climate change add to the problems." In Vietnam, for example, coffee production is driving deforestation.

The researchers are using the same techniques to make coffee that others are using to make "lab-grown," or cultivated, meat. Coffee plant cells were cultured in the lab, and then placed in bioreactors filled with nutrient medium to grow. It's a little easier to grow coffee than something like beef. "The nutrient media for plant-cell cultures are much less complex, i.e., cheaper, than those for animal cells," Rischer says. "Scaling up is also easier because plant cells grow freely, suspended in the medium, while animal cells grow attached to surfaces."

The process results in an off-white biomass that's dried into a powder, then roasted to a dark brown color that looks like coffee grounds. The scientists recently brewed their first cups of the lab-grown coffee, which they say tastes and smells like ordinary coffee. It's also possible to make different varieties. "Cell cultures of different coffee cultivars can be established, and the roasting process can be modified, in order to produce coffee with very different character," says Rischer. "The cultivation process can be modified in order to generate more or less of certain compounds, such as caffeine or flavors." The lab plans to work with companies that can commercialize the new process.

Medicine

FDA Panel Rejects Plan To Administer Pfizer's COVID-19 Booster Doses To General Public (cnbc.com) 151

An anonymous reader quotes a report from CNBC: An influential Food and Drug Administration advisory committee on Friday resoundingly rejected a plan to administer booster shots of Pfizer and BioNTech's Covid-19 vaccine to the general public, saying they needed more data. The panel, however, could still recommend the shots for other populations. Scientists continued debating the need for a third dose of the vaccines for people 65 and older and other vulnerable populations after their initial vote. "It's likely beneficial, in my opinion, for the elderly, and may eventually be indicated for the general population. I just don't think we're there yet in terms of the data," Dr. Ofer Levy, a vaccine and infectious disease specialist at Boston Children's Hospital, said after voting against the original proposal. The final tally failed 16-2.

In a paper published days before the advisory committee meeting, a leading group of scientists said available data showed vaccine protection against severe disease persists, even as the effectiveness against mild disease wanes over time. The authors, including two high-ranking FDA officials and multiple scientists from the World Health Organization, argued Monday in the medical journal The Lancet that widely distributing booster shots to the general public is not appropriate at this time. In outlining plans last month to start distributing boosters as early as next week, administration officials cited three CDC studies that showed the vaccines' protection against Covid diminished over several months. Senior health officials said at the time they worried protection against severe disease, hospitalization and death "could" diminish in the months ahead, especially among those who are at higher risk or were vaccinated during the earlier phases of the vaccination rollout. Before the vote, some committee members said they were concerned that there wasn't enough data to make a recommendation, while others argued third shots should be limited to certain groups, such as people over age 60 who are known to be at higher risk of severe disease. Some members raised concerns about the risk of myocarditis in younger people, saying more research is needed.

Space

New Type of Dark Energy Could Solve Universe Expansion Mystery (nature.com) 63

Cosmologists have found signs that a second type of dark energy -- the ubiquitous but enigmatic substance that is pushing the current Universe's expansion to accelerate -- might have existed in the first 300,000 years after the Big Bang. From a report: Two separate studies -- both posted on the arXiv preprint server in the past week -- have detected a tentative first trace of this 'early dark energy' in data collected between 2013 and 2016 by the Atacama Cosmology Telescope (ACT) in Chile. If the findings are confirmed, they could help to solve a long-standing conundrum surrounding data about the early Universe, which seem to be incompatible with the rate of cosmic expansion measured today. But the data are preliminary and don't show definitively whether this form of dark energy really existed.

"There are a number of reasons to be careful to take this as a discovery of new physics," says Silvia Galli, a cosmologist at the Paris Institute of Astrophysics. The authors of both preprints -- one posted by the ACT team, and the other by an independent group -- admit that the data are not yet strong enough to detect early dark energy with high confidence. But they say that further observations from the ACT and another observatory, the South Pole Telescope in Antarctica, could provide a more stringent test soon. "If this really is true -- if the early Universe really did feature early dark energy -- then we should see a strong signal," says Colin Hill, a co-author of the ACT team's paper who is a cosmologist at Columbia University in New York City.

Space

Amateur Astronomer Spots Possible New Impact Flash At Jupiter (skyandtelescope.org) 32

RockDoctor writes: A recent flurry of posts to astronomy news sites points to an amateur astronomer spotting a new impact on Jupiter. Every such case documented improves our estimates of how many bodies are flying around in the (inner) solar system, and improves our estimates of how likely we are to get another hit in a year, a decade, or a century. Sky and Telescope has been pulling in more information. SpaceWeather.com has an image of the impact. (Note: some of these images have been "flipped" to an "on sky" orientation, and others haven't because astronomical telescopes generally produce an inverted image since it requires fewer reflections.) Estimates of the impactor size are unclear, but minimum sizes seem to be in the several kg range. Depending on how long the flash lasted, it could go up into the tons, which is important for estimating the number of potentially hazardous objects in the inner solar system. Space and Telescope's correspondents put the size at "up to" (important words!) the 30m range (100ft in Tudor measure), which would be around 10,000 tons -- a Chelyabinsk 2013-size body.
Earth

Ozone Hole Over Antarctica Larger Than Usual, Scientists Say (www.cbc.ca) 52

An anonymous reader quotes a report from CBC.ca: Scientists say the Southern Hemisphere ozone hole is larger than usual and already surpasses the size of Antarctica. The European Union's Copernicus Atmosphere Monitoring Service (CAMS) said Thursday that the ozone hole, which appears every year during the Southern Hemisphere spring, has grown considerably in the past week following an average start. "Forecasts show that this year's hole has evolved into a rather larger than usual one," said Vincent-Henri Peuch, who heads the EU's satellite monitoring service. "We are looking at a quite big and potentially also deep ozone hole," he said. The Montreal Protocol, signed in 1987, led to a ban on a group of chemicals called halocarbons that were blamed for exacerbating the annual ozone hole. Experts say it's likely to take until the 2060s for ozone-depleting substances to be completely phased out. "[S]cientists have been closely monitoring the development of this year's ozone hole over the South Pole, which has now reached an extent larger than Antarctica," says the Copernicus Atmosphere Monitoring Service. "After a rather standard start, the 2021 ozone hole has considerably grown in the last two weeks and is now larger than 75% of ozone holes at that stage in the season since 1979."

Vincent-Henri Peuch, Director of the Copernicus Atmosphere Monitoring Service, adds: "This year, the ozone hole developed as expected at the start of the season. It seems pretty similar to last year's, which also wasn't really exceptional until early September, but then turned into one of the largest and longest-lasting ozone holes in our data record later in the season. Now our forecasts show that this year's hole has evolved into a rather larger than usual one. The vortex is quite stable and the stratospheric temperatures are even lower than last year, so it may continue to grow slightly over the next two or three weeks."
Mars

NASA Confirms Thousands of Massive, Ancient Volcanic Eruptions On Mars (nasa.gov) 49

Scientists found evidence that a region of northern Mars called Arabia Terra experienced thousands of "super eruptions," the biggest volcanic eruptions known, over a 500-million-year period. NASA reports the findings in a post: Some volcanoes can produce eruptions so powerful they release oceans of dust and toxic gases into the air, blocking out sunlight and changing a planet's climate for decades. By studying the topography and mineral composition of a portion of the Arabia Terra region in northern Mars, scientists recently found evidence for thousands of such eruptions, or "super eruptions," which are the most violent volcanic explosions known. Spewing water vapor, carbon dioxide, and sulfur dioxide into the air, these explosions tore through the Martian surface over a 500-million-year period about 4 billion years ago. Scientists reported this estimate in a paper published in the journal Geophysical Research Letters in July 2021. "Each one of these eruptions would have had a significant climate impact -- maybe the released gas made the atmosphere thicker or blocked the Sun and made the atmosphere colder," said Patrick Whelley, a geologist at NASA's Goddard Space Flight Center in Greenbelt, Maryland, who led the Arabia Terra analysis. "Modelers of the Martian climate will have some work to do to try to understand the impact of the volcanoes."
[...]
One remaining question is how a planet can have only one type of volcano littering a region. On Earth volcanoes capable of super eruptions -- the most recent erupted 76,000 years ago in Sumatra, Indonesia -- are dispersed around the globe and exist in the same areas as other volcano types. Mars, too, has many other types of volcanoes, including the biggest volcano in the solar system called Olympus Mons. Olympus Mons is 100 times larger by volume than Earth's largest volcano of Mauna Loa in Hawaii, and is known as a "shield volcano," which drains lava down a gently sloping mountain. Arabia Terra so far has the only evidence of explosive volcanoes on Mars. It's possible that super-eruptive volcanoes were concentrated in regions on Earth but have been eroded physically and chemically or moved around the globe as continents shifted due to plate tectonics. These types of explosive volcanoes also could exist in regions of Jupiter's moon Io or could have been clustered on Venus. Whatever the case may be, Richardson hopes Arabia Terra will teach scientists something new about geological processes that help shape planets and moons.

Science

Physicists Make Square Droplets and Liquid Lattices (phys.org) 13

Aalto University reports via Phys.Org: When two substances are brought together, they will eventually settle into a steady state called thermodynamic equilibrium; examples include oil floating on top of water and milk mixing uniformly into coffee. Researchers at Aalto University in Finland wanted to disrupt this sort of state to see what happens -- and whether they can control the outcome. In their work, the team used combinations of oils with different dielectric constants and conductivities. They then subjected the liquids to an electric field. "When we turn on an electric field over the mixture, electrical charge accumulates at the interface between the oils. This charge density shears the interface out of thermodynamic equilibrium and into interesting formations," explains Dr. Nikos Kyriakopoulos, one of the authors of the paper. As well as being disrupted by the electric field, the liquids were confined into a thin, nearly two-dimensional sheet. This combination led to the oils reshaping into various completely unexpected droplets and patterns.

The droplets in the experiment could be made into squares and hexagons with straight sides, which is almost impossible in nature, where small bubbles and droplets tend to form spheres. The two liquids could be also made to form into interconnected lattices: grid patterns that occur regularly in solid materials but are unheard of in liquid mixtures. The liquids can even be coaxed into forming a torus, a donut shape, which was stable and held its shape while the field was applied -- unlike in nature, as liquids have a strong tendency to collapse in and fill the hole at the center. The liquids can also form filaments that roll and rotate around an axis. One of the exciting results of this work is the ability to create temporary structures with a controlled and well-defined size which can be turned on and off with voltage, an area that the researchers are interested in exploring further for creating voltage-controlled optical devices. Another potential outcome is the ability to create interacting populations of rolling microfilaments and microdroplets that, at some elementary level, mimic the dynamics and collective behavior of microorganisms like bacteria and microalgae that propel themselves using completely different mechanisms.
The research has been published in the journal Science Advances.
Space

SpaceX Launches First All-Tourist Crew Into Orbit (cnn.com) 127

SpaceX has successfully launched the crew of Inspiration4 into orbit. It's the first-ever orbital flight crewed entirely by tourists. From a report: The SpaceX rocket blasted off from NASA's Kennedy Space Center just after 8 p.m. ET. The crew includes 38-year-old billionaire Jared Isaacman, who personally financed the trip; Hayley Arceneux, 29, a childhood cancer survivor and current St. Jude physician assistant; Sian Proctor, 51, a geologist and community college teacher with a PhD; and Chris Sembroski, a 42-year-old Lockheed Martin employee and lifelong space fan who claimed his seat through an online raffle. The passengers will now spend three days aboard their 13-foot-wide Crew Dragon capsule in orbit at a 350-mile altitude.
Earth

Most Plans for New Coal Plants Scrapped Since Paris Agreement (theguardian.com) 98

The global pipeline of new coal power plants has collapsed since the 2015 Paris climate agreement, according to research that suggests the end of the polluting energy source is in sight. From a report: The report found that more than three-quarters of the world's planned plants have been scrapped since the climate deal was signed, meaning 44 countries no longer have any future coal power plans. The climate groups behind the report -- E3G, Global Energy Monitor and Ember -- said those countries now have the opportunity to join the 40 countries that have already signed up to a "no new coal" commitment to help tackle global carbon emissions. "Only five years ago, there were so many new coal power plants planned to be built, but most of these have now been either officially halted, or are paused and unlikely to ever be built," said Dave Jones, from Ember. "Multiple countries can add their voices to a snowball of public commitments to 'no new coal,' collectively delivering a key milestone to sealing coal's fate."
Science

When the Wind Stops Blowing, an Energy Storm Brews (thetimes.co.uk) 132

An anonymous reader shares a report (paywalled): Gas made up the largest share of the UK's energy mix in 2020, at 34%; followed by wind on a quarter; nuclear at 17%; biomass at 6.5% and solar at 4.4%. Despite the progress of renewables, detractors note the problems arise when the sun doesn't shine and the wind doesn't blow. Until reliable battery storage for renewable energy is developed, these sources can only ever be intermittent, critics argue, and some infrastructure will continue to use oil for back-up generation. It is a case made by the nuclear industry, which says that it is uniquely placed to provide the zero-emissions baseload the grid requires. Runaway gas prices are already sparking concern across the energy sector, with fears that consumers are facing a "bill shock" this winter. Personal finance expert Martin Lewis warned his readers last week: "This autumn's signature noise will be a deep thud... the sound of jaws hitting the floor as people finally see the practical evidence of the energy bill catastrophe laid bare."

UK gas prices reached 130p per therm last week, compared to 30p a year ago. In an unusual inversion, gas prices are trading above the equivalent price of Brent, the benchmark for crude oil. Both supply and demand factors are at play. The reopening of economies after Covid lockdowns has pushed up demand for gas. Countries are also trying to cut their use of coal, and switching to less polluting gas as a result. Europe is thus competing with Asia for shipments of liquid natural gas (LNG), a more mobile form of gas that is increasingly popular. Supply is also tight: a particularly cold winter meant Europe used up more reserves than usual and these have not been replenished. A spate of outages at gas production plants in different parts of the world have compounded the problem. To make matters worse, the UK has relatively low levels of gas storage. The country has eight gas storage sites that can hold an estimated 12 days of supply. Storage capacity was drastically reduced when the Rough site under the North Sea was closed in 2017 for safety and economic reasons. Rough, a disused oil field, could hold around 70% of UK gas reserves. "The market hasn't been able to fill up storage as we move into this winter. And hence we are very exposed, especially if it is another cold winter like last year," said James Huckstepp, analyst at S&P Platts. "Consumers are starting to recognise that their energy bills are going to be much higher this winter."

Space

SpaceX Rocket To Take World's First All-Civilian Crew Into Orbit (theguardian.com) 47

The world's first crew of "amateur astronauts" is preparing to blast off on a mission that will carry them into orbit before bringing them back down to Earth at the weekend. From a report: The four civilians, who have spent the past few months on an astronaut training course, are due to launch on SpaceX's Falcon 9 rocket from the Kennedy Space Center in Florida at 8.02pm local time on Wednesday (1.02am UK time on Thursday). Barring any glitches, the two men and two women on the Inspiration4 mission are expected to orbit the planet for three or four days, performing experiments and admiring the view through a glass dome fitted to their Dragon capsule, before splashing down in the Atlantic Ocean.

Touted as "the world's first all-civilian mission to orbit," the launch is the latest to promote the virtues of space tourism and follows suborbital flights in July by Sir Richard Branson on Virgin Galactic's SpaceShipTwo -- which has since been grounded for going off course -- and Jeff Bezos on Blue Origin's New Shepard rocket. While the Inspiration4 crew has had flying lessons, centrifuge sessions to experience the G-forces of launch, and hours of training in SpaceX's capsule simulator, the mission will be almost entirely automated. The capsule is due to orbit Earth at an altitude of 360 miles (575km), about 93 miles higher than the International Space Station.
UPDATE: They did it.
Medicine

Indian Researchers Create a Raspberry-Pi-Based Device To Monitor Health (ieee.org) 47

Two researchers in India have developed a new blood test that is simple, affordable, and easily deployed anywhere where a source of electricity is available. IEEE Spectrum reports: Sangeeta Palekar is a researcher at Shri Ramdeobaba College of Engineering and Management (RCOEM) who helped devise the new design. She and her colleague, Jayu Kalambe, understand how powerful a simple blood test can be. "Routine blood tests can help track and eliminate the threat of many potential diseases," explains Palekar, noting that blood tests make up roughly one-third of all pathology laboratory tests. [...] [The new analyzer] involves an automated fluid dispenser that adds a controlled amount of reagent into the blood sample. Light is then passed through the sample, and a Raspberry Pi computer analyzes the data. The system can be adapted to analyze any biochemical substances in the blood by simply modifying the reagent and spectral wavelength that's used. [...] When comparing the data obtained by their biochemical analyzer to the known results obtain by standard laboratory equipment, they found the data matched almost perfectly. What's more, the device could yield accurate results in just half a minute. The researchers describe the results in a study published in IEEE Sensors Journal.
Earth

Simple Mathematical Law Predicts Movement In Cities Around the World (scientificamerican.com) 54

An anonymous reader quotes a report from Scientific American: The people who happen to be in a city center at any given moment may seem like a random collection of individuals. But new research featuring a simple mathematical law shows that urban travel patterns worldwide are, in fact, remarkably predictable regardless of location -- an insight that could enhance models of disease spread and help to optimize city planning. Studying anonymized cell-phone data, researchers discovered what is known as an inverse square relation between the number of people in a given urban location and the distance they traveled to get there, as well as how frequently they made the trip. It may seem intuitive that people visit nearby locations frequently and distant ones less so, but the newly discovered relation puts the concept into specific numerical terms. It accurately predicts, for instance, that the number of people coming from two kilometers away five times per week will be the same as the number coming from five kilometers twice a week. The researchers' new visitation law, and a versatile model of individuals' movements within cities based on it, was reported in Nature.

The researchers analyzed data from about eight million people between 2006 and 2013 in six urban locations: Boston, Singapore, Lisbon and Porto in Portugal, Dakar in Senegal, and Abidjan in Ivory Coast. Previous analyses have used cell-phone data to study individuals' travel paths; this study focused instead on locations and examined how many people were visiting, from how far and how frequently. The researchers found that all the unique choices people makeâ"from dropping kids at school to shopping or commuting -- obey this inverse square law when considered in aggregate. One explanation for this strong statistical pattern is that traveling requires time and energy, and people have limited resources for it.

Science

Scientists Can Now Assemble Entire Genomes On Their Personal Computers In Minutes (phys.org) 44

Researchers have developed a technique for reconstructing whole genomes, including the human genome, on a personal computer. "This technique is about a hundred times faster than current state-of-the-art approaches and uses one-fifth the resources," reports Phys.Org. From the report: The study, published September 14 in the journal Cell Systems, allows for a more compact representation of genome data inspired by the way in which words, rather than letters, offer condensed building blocks for language models. [...] To approach genome assembly more efficiently than current techniques, which involve making pairwise comparisons between all possible pairs of reads, [researchers] turned to language models. Building from the concept of a de Bruijn graph, a simple, efficient data structure used for genome assembly, the researchers developed a minimizer-space de Bruin graph (mdBG), which uses short sequences of nucleotides called minimizers instead of single nucleotides. "Our minimizer-space de Bruijn graphs store only a small fraction of the total nucleotides, while preserving the overall genome structure, enabling them to be orders of magnitude more efficient than classical de Bruijn graphs," says [one of the researchers].

The researchers applied their method to assemble real HiFi data (which has almost perfect single-molecule read accuracy) for Drosophila melanogaster fruit flies, as well as human genome data provided by Pacific Biosciences (PacBio). When they evaluated the resulting genomes, [researchers] found that their mdBG-based software required about 33 times less time and 8 times less random-access memory (RAM) computing hardware than other genome assemblers. Their software performed genome assembly for the HiFi human data 81 times faster with 18 times less memory usage than the Peregrine assembler and 338 times faster with 19 times less memory usage than the hifiasm assembler. Next, [researchers] used their method to construct an index for a collection of 661,406 bacterial genomes, the largest collection of its kind to date. They found that the novel technique could search the entire collection for antimicrobial resistance genes in 13 minutes -- a process that took 7 hours using standard sequence alignment.

Medicine

Millions With Eye Conditions at Higher Risk of Dementia, Shows Research (theguardian.com) 38

Millions of people with eye conditions including age-related macular degeneration, cataracts and diabetes-related eye disease have an increased risk of developing dementia, new research shows. From a report: Vision impairment can be one of the first signs of the disease, which is predicted to affect more than 130 million people worldwide by 2050. Previous research has suggested there could be a link between eye conditions that cause vision impairment, and cognitive impairment. However, the incidence of these conditions increases with age, as do systemic conditions such as diabetes, high blood pressure, heart disease, depression and stroke, which are all accepted risk factors for dementia. That meant it was unclear whether eye conditions were linked with a higher incidence of dementia independently of systemic conditions.

Now researchers have found that age-related macular degeneration, cataracts and diabetes-related eye disease are independently associated with increased risk of dementia, according to a new study published in the British Journal of Ophthalmology. The research examined data from 12,364 British adults aged 55 to 73, who were taking part in the UK Biobank study. They were assessed in 2006 and again in 2010 with their health information tracked until early 2021.

Science

Researchers Toilet-Trained Cows In Hopes of Reducing Their Greenhouse Gas Emissions (gizmodo.com) 78

An anonymous reader quotes a report from Gizmodo: Researchers in Germany recently demonstrated that cattle can be toilet trained to reduce some of their climate impact. By having the young cows pee in latrines made of turf, the team of experts in animal behavior and agricultural science stopped the natural production of nitrous oxide from the cow's urine. Cows are notorious for their contributions to greenhouse gas emissions in large-scale farming; the animals belch (and to a lesser extent, fart) methane, and their urine and poop combine to produce ammonia, which isn't a greenhouse gas itself but is converted into nitrous oxide by microbes in the soil. The team trained nearly a dozen calves to urinate in a makeshift latrine, nicknamed the MooLoo, thereby stopping the urine from becoming part of the problem. The research was published on Monday in Current Biology.

Training the cows was a fairly simple process on paper. First, the scientists penned 16 of the animals into the latrine area. When the cows urinated, they were given food or sugar water, tacit endorsements of their decisions. The next step was teaching them not to pee in the pasture, which the team did by implementing an unpleasant stimulus whenever they did so. That stimulus was originally a loud noise, but when the researchers realized the animals didn't mind it much, they swapped it out for spraying the cows with water, a relatively harmless message of "bad cow." The team found that the cows' ability to hold it and go in the latrine was equivalent to a child's ability with the toilet -- even superior to that of young children. [The team] hopes to bring the latrines to other sites and increase the number of potty-trained cows. "To do this, we must first automate the whole training procedure and adapt it to the conditions on the farm," he told Gizmodo in an email. "We want to tackle this in a follow-up project."
The report notes there are a couple of limitations with this effort. "First, not all of the cows could be potty-trained. Only 10 of the 16 calves quickly learned to pee in the proper place and could routinely reproduce that action," reports Gizmodo. "That's trouble for anyone trying to scale up the practice (there are more than 1 billion cows on Earth). Second, the experiment didn't cover defecation, and cow poop also contains ammonia. There's also still the major problem of methane, a greenhouse gas 80 times more potent than carbon dioxide, tied to cows burps and farts."
Medicine

Engineers Grow Pancreatic 'Organoids' That Mimic the Real Thing (mit.edu) 8

Researchers from MIT have developed a new way to grow tiny replicas of the pancreas, using either healthy or cancerous pancreatic cells. They believe that their "specialized gel" could also be useful for studying lung, colorectal, and other cancers, including how potential cancer drugs affect tumors and their environment. The findings have been published in the journal Nature Materials. MIT reports: Using a specialized gel that mimics the extracellular environment surrounding the pancreas, the researchers were able to grow pancreatic "organoids," allowing them to study the important interactions between pancreatic tumors and their environment. Unlike some of the gels now used to grow tissue, the new MIT gel is completely synthetic, easy to assemble and can be produced with a consistent composition every time. The researchers have also shown that their new gel can be used to grow other types of tissue, including intestinal and endometrial tissue. [...] About 10 years ago, [Linda Griffith, the School of Engineering Professor of Teaching Innovation and a professor of biological engineering and mechanical engineering, and her lab] started to work on designing a synthetic gel that could be used to grow epithelial cells, which form the sheets that line most organs, along with other supportive cells.

The gel they developed is based on polyethylene glycol (PEG), a polymer that is often used for medical applications because it doesn't interact with living cells. By studying the biochemical and biophysical properties of the extracellular matrix, which surrounds organs in the body, the researchers were able to identify features they could incorporate into the PEG gel to help cells grow in it. One key feature is the presence of molecules called peptide ligands, which interact with cell surface proteins called integrins. The sticky binding between ligands and integrins allows cells to adhere to the gel and form organoids. The researchers found that incorporating small synthetic peptides derived from fibronectin and collagen in their gels allowed them to grow a variety of epithelial tissues, including intestinal tissue. They showed that supportive cells called stromal cells, along with immune cells, can also thrive in this environment.

In the new study, Griffith and [Claus Jorgensen, a group leader at the Cancer Research UK Manchester Institute] wanted to see if the gel could also be used to support the growth of normal pancreatic organoids and pancreatic tumors. Traditionally, it has been difficult to grow pancreatic tissue in a manner that replicates both the cancerous cells and the supporting environment, because once pancreatic tumor cells are removed from the body, they lose their distinctive cancerous traits. Griffith's lab developed a protocol to produce the new gel, and then teamed up with Jorgensen's lab, which studies the biology of pancreatic cancer, to test it. Jorgensen and his students were able to produce the gel and use it to grow pancreatic organoids, using healthy or cancerous pancreatic cells derived from mice. "We got the protocol from Linda and we got the reagents in, and then it just worked," Jorgensen says. "I think that speaks volumes of how robust the system is and how easy it is to implement in the lab."

Science

Firm Raises $15 Million To Bring Back Woolly Mammoth From Extinction (theguardian.com) 91

Ten thousand years after woolly mammoths vanished from the face of the Earth, scientists are embarking on an ambitious project to bring the beasts back to the Arctic tundra. From a report: The prospect of recreating mammoths and returning them to the wild has been discussed -- seriously at times -- for more than a decade, but on Monday researchers announced fresh funding they believe could make their dream a reality. The boost comes in the form of $15m raised by the bioscience and genetics company Colossal, co-founded by Ben Lamm, a tech and software entrepreneur, and George Church, a professor of genetics at Harvard Medical School who has pioneered new approaches to gene editing.

The scientists have set their initial sights on creating an elephant-mammoth hybrid by making embryos in the laboratory that carry mammoth DNA. The starting point for the project involves taking skin cells from Asian elephants, which are threatened with extinction, and reprogramming them into more versatile stem cells that carry mammoth DNA. The particular genes that are responsible for mammoth hair, insulating fat layers and other cold climate adaptions are identified by comparing mammoth genomes extracted from animals recovered from the permafrost with those from the related Asian elephants. These embryos would then be carried to term in a surrogate mother or potentially in an artificial womb. If all goes to plan -- and the hurdles are far from trivial -- the researchers hope to have their first set of calves in six years.

Mars

Perseverance's New Rock Samples Reveal Water Was Present on Mars For a Long Time (nasa.gov) 17

NASA's Mars rover Perseverance collected its second rock sample this week — and Friday Caltech's Ken Farley, a project scientist for the mission, announced that they've learned something.

"It's a big deal that the water was there a long time." The Perseverance science team already knew a lake once filled the crater; for how long has been more uncertain. The scientists couldn't dismiss the possibility that Jezero's lake was a "flash in the pan": floodwaters could have rapidly filled the impact crater and dried up in the space of 50 years, for example. But the level of alteration that scientists see in the rock that provided the core samples — as well as in the rock the team targeted on their first sample-acquisition attempt — suggests that groundwater was present for a long time.

This groundwater could have been related to the lake that was once in Jezero, or it could have traveled through the rocks long after the lake had dried up. Though scientists still can't say whether any of the water that altered these rocks was present for tens of thousands or for millions of years, they feel more certain that it was there for long enough to make the area more welcoming to microscopic life in the past.

And they discovered something interesting in the rock samples: salts. These salts may have formed when groundwater flowed through and altered the original minerals in the rock, or more likely when liquid water evaporated, leaving the salts. The salt minerals in these first two rock cores may also have trapped tiny bubbles of ancient Martian water. If present, they could serve as microscopic time capsules, offering clues about the ancient climate and habitability of Mars.

Salt minerals are also well-known on Earth for their ability to preserve signs of ancient life.

Space

Steve Wozniak Shares a Video About His New Space Startup (twitter.com) 80

Tonight 71-year-old Apple co-founder Steve Wozniak tweeted ten words: "A Private space company is starting up, unlike the others."

The tweet also included the URL for a new video just uploaded tonight to YouTube about a company called Privateer.

"Together we'll go far," says the narrator, later offering these thoughts on the people of our planet. "We are explorers. We are dreamers, risk-takers, engineers, and star gazers. We are human. And it's up to us to work together to do what is right and what is good."

The video's tagline? "The sky is no longer the limit.

The same tagline appears at Privateer.com, followed by two short sentences. "We are in stealth mode. We'll see you at AMOS in September 2021 in Maui, Hawaii." (With AMOS apparently, being the Advanced Maui Optical and Space Surveillance Technologies Conference running from this Tuesday through Friday.)

There's very little information about the company — although last month a 3D printing site reported Wozniak's company appeared to be using a printer for high-strength titanium — and suggested the company might have something to do with cleaning up space junk.

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